Exploring APOE4 in iPSC-based AD models

Exploring APOE4 in iPSC-based Alzheimer’s Disease models

Exploring APOE4 in iPSC-based Alzheimer’s Disease models

Exploring APOE4 in iPSC-based AD models

As researchers unravel the complex processes behind Alzheimer’s Disease (AD), APOE4 has emerged as a high-risk allele for sporadic AD (sAD). In this article, we explore the link between APOE4 and sAD and look at the role of APOE4 in advanced in vitro AD models powered by human iPSCs.

Alzheimer’s Disease and the 99.6% problem

Over 40 million patients worldwide suffer from Alzheimer’s Disease (AD) with an estimated annual societal cost of over $1 trillion1. Despite being the most common form of dementia worldwide, there are still limited therapies and an estimated 99.6% failure rate for pre-clinical therapies2. AD is predicted to triple by 2050, with a global cost of over $9 trillion3.

To cope with the pressing need for new therapies, researchers have been turning to iPSC-based models. Traditional animal models have offered some insights, but there is still a translational gap- after all, mice don’t get Alzheimer’s! Human iPSC-based models can be used to provide greater relevance for drug discovery, as researchers can use cells derived from AD patients to probe disease mechanisms and test potential therapies.

Patient-derived cells enable researchers to probe disease mechanisms related to specific mutations including those relating to familial AD (APP, PSEN1 and PSEN2) and, importantly, those associated with sporadic AD (sAD) representing ~95% of AD cases. The APOE4 allele has gained increasing interest as a major risk factor for sporadic AD (sAD), opening up a potential avenue for research and drug discovery4. But what has the research found, and how can we incorporate this into iPSC-based models?

The role of APOE4 in Alzheimer’s Disease

The APOE gene codes for the apolipoprotein E molecule that plays a key role in lipid transport, neuronal repair and remyelination4. There are three main isoforms, APOE2, APOE3 and APOE4, that have slightly different structural and functional properties.

Evidence from animal models and in vitro research has pointed to APOE4 as a major risk factor for AD, with a protective role for the APOE2 genotype and a neutral role for the APOE3 genotype4,5,6. Homozygous APOE4 (i.e, E4/E4) has been associated with the highest risk (around 15x) of developing Alzheimer’s Disease, leading researchers to investigate the value of APOE4 in advanced in vitro AD models.

This was taken a step further in a recent Nature Medicine paper from Fortea et al. looking at APOE4 homozygosity and its potential role as a genetically distinct form of Alzheimer’s Disease (AD)5.

The researchers performed post-mortem analysis from over 3,000 donors and discovered signs of AD in almost all of the APOE4 homozygous patient samples. Clinical studies of over 10,000 patients revealed higher levels of AD biomarkers in APOE4 homozygous patients compared to APOE3, and by age 65, almost all of the APOE4 homozygous patients had high levels of amyloid beta. The researchers have concluded that APOE4 homozygosity may represent a genetically distinct cause of AD, which may need “individualized prevention strategies, clinical trials and treatments”

While the specific conclusion has been disputed and the study has some notable drawbacks (for example, participants were mainly of European ancestry) it highlights the complexity of AD pathophysiology and the need to incorporate a diverse range of genotypes in advanced in vitro models.

Unlocking iPSC technology for APOE4 Alzheimer’s Disease models

At Axol Bioscience, we support researchers looking to unlock the benefits of iPSC technology for neurodegenerative disease research including Alzheimer’s Disease.

If you’d like to incorporate APOE4 into your in vitro projects, here are the key points you need to know:

  • Our ax7111 iPSC line is derived from an 87-year-old donor who is APOE4 homozygous
  • We have neural stem cells derived from this line (ax0111) available off-the-shelf for rapid maturation to end-point cells
  • Previously, we have performed custom differentiation of our APOE4 homozygous line to astrocytes and microglia. If you’d like to discuss a similar project, we are happy to discuss.
  • Alongside ax7111, we have healthy control lines for use in advanced in vitro AD models

Below you can find a summary of the main iPSC lines and donor information:

iPSC Disease Sex Age APOE Genotype Off-the-shelf products
CENSOi004-E Healthy M 40-50yo E2/E3 Cortical inhibitory interneurons (ax0662)

Microglia (ax0664)

ax7112 AD (PSEN1) F 38yo E3/E3 Neural stem cells (ax0112)
ax7113 AD (PSEN1) M 53yo E2/E3 Neural stem cells (ax0113)
ax7114 AD (PSEN1) F 31yo E3/E4 Neural stem cells (ax0114)
CENSOi074-A AD M 60yo E3/E4
CENSOi077-C AD F 52yo E3/E4

We can also carry out ‘made-to-order’ production runs using iPSCs from our axoLines range or using your lines, comprising custom differentiation with a minimum order quantity of 10 vials. When using your lines, a review of ethics, quality and line onboarding will be required.

If you’d like to discuss how we could unlock iPSC technology for your Alzheimer’s Disease research, get in contact at operations@axolbio.com

Key takeaways

  • While animal models have provided valuable insights into the processes underlying Alzheimer’s Disease, the persistent translational gap and 99.6% therapy failure rate has led researchers to explore more human-relevant model systems fueled by human iPSCs
  • Alongside this, research has established APOE4 as a major risk factor for sporadic Alzheimer’s Disease, with two copies conferring a 15x increased risk. APOE4 is therefore becoming an increasingly important component of advanced in vitro Alzheimer’s Disease models
  • At Axol Bioscience, we’re supporting researchers with our library of patient-derived iPSC lines, including an APOE4 homozygous patient, alongside healthy control lines and custom differentiation

 


1 World Health Organization (2023) Dementia: Dementia (who.int)

2 Cummings JL, Morstorf T, Zhong K. Alzheimer’s disease drug-development pipeline: few candidates, frequent failures. Alzheimers Res Ther. 2014 Jul 3;6(4):37. doi: https://doi.org/10.1186/alzrt269 . PMID: 25024750; PMCID: PMC4095696.

3 Nandi A, Counts N, Chen S, Seligman B, Tortorice D, Vigo D, Bloom DE. Global and regional projections of the economic burden of Alzheimer’s disease and related dementias from 2019 to 2050: A value of statistical life approach. EClinicalMedicine. 2022 Jul 22;51:101580. doi: https://doi.org/10.1016/j.eclinm.2022.101580 . PMID: 35898316; PMCID: PMC9310134.

4 Huang Y, Mahley RW. Apolipoprotein E: structure and function in lipid metabolism, neurobiology, and Alzheimer’s diseases. Neurobiol Dis. 2014 Dec;72 Pt A:3-12. doi: https://doi.org/10.1016/j.nbd.2014.08.025 Epub 2014 Aug 27. PMID: 25173806; PMCID: PMC4253862.

5 Fortea, J., Pegueroles, J., Alcolea, D. et al. APOE4 homozygozity represents a distinct genetic form of Alzheimer’s disease. Nat Med (2024). https://doi.org/10.1038/s41591-024-02931-w

6 Hunsberger HC, Pinky PD, Smith W, Suppiramaniam V, Reed MN. The role of APOE4 in Alzheimer’s disease: strategies for future therapeutic interventions. Neuronal Signal. 2019 Jun;3(2):NS20180203. doi: https://doi.org/10.1042/NS20180203. Epub 2019 Apr 18. PMID: 32269835; PMCID: PMC7104324.

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